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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015909888.1_cds_XP_016459984.1_53452
CDS Infomation

[gene=LOC107783521] [db_xref=GeneID:107783521] [protein=sodium transporter HKT1-like isoform X1] [protein_id=XP_016459984.1] [location=join(207735..208900,212747..212977,213585..213783)] [gbkey=CDS]
Sequence

ATGAAAATGAAGCTGTTTTCATCATCTTACCGCCAAGGTTTTTTCTTCTCTATCTTTCAT
ATTCTCAATCTTGGCGTAAAGCCATTTTGGATTGAAGTAAGTTATTTCATGATCCTTTCA
TTGTTAGGTTTGTTAGCTTTGACTATTTCGAAACCTAGAACTCTGCCGTCATTTAGGCCT
CAAAACCTAGATGTGTTTTTCACTTCTGTTTCTGCTGCCACAGTTTCTAGCATGTCCACT
GTTGAAATGGAGGTTTTCTCAAATGCCCAACTTGTCTTCATAACCATGTTAATGTTTCTT
GGTGGGGAGGCCTTTACCTCTTTTCTTAGACTTCAACTCATGAAGTCCAAACTTTCCATG
GAAAAAACGGTTTTACAAAACAAAATTGAAACTTCAAACTCTATTATTAGCATAGATTCT
CACGACTCTTCAAACTCTCCTAGGAACTCTATCCATCATCTTGAGCTAGGACATGAACAA
GAGGATAGTAATTTAGAACATGCAATAATCAATTCTATGGAGGACAGTGAGGCAATTGTC
AAATTGAAGTCTTTGAGATTCTTGAGTTATGTGGTTTTTGGTTATATTCTAGGTGTTGTT
GTTCTTGGTTCTTCCTTAGTTTCTATCTACGTAAGCTTTATTCCAAGTGCAAAACAAGTT
CTCAAAGAAAAAGGGCTTAACTTGCATACTTTTTCCCTCTTCACCACAGTTTCAACATTT
GCAAATTGTGGGTTTGTCCCTACAAATGAAAACATGATGGTTTTCAGGAAAAATTCAGGC
CTTCTTCTCATTCTTATACCTCAAGTCCTTCTTGGAAACACATTATATGCTCCTTGCTTA
CGCCTCACTATTTGGTTTCTTTGGAAAATCACAAAGAGAGGTGAGTTTGAGTATATCATG
AAGAACTCAAAACGAGTAGGATACTCACATATTTTTCCAAATTTGGAAACCATGGCTCTT
GCAACTACTGTTTTGGGATTCATATCCATTCAGTTTGTTGTCTTTTGTTCATTGGAATGG
AATTCTGAAGCCACTGCTGGATTGAGTTCTTATGAAAAACTGGTGGGATCATTGTTTGAA
GTTGTGAATACAAGGCATACTGGTGAATCTGTGTTCGATCTTTCAACCCTTACCCCAGCA
ATCTTAGTGTTATTCGCCGTAATGATGTATCTATCACCCTATACTTCTTTTTTGCCAATT
GATAGTAATGAAGAGCGCTTGGAAACTACAGAAAGAATGAACAGGAGAAAAGGGAGCAGC
TTAGTGGAGTACGTATCATTCTCACATCTTTCTTATTTGGTCATTTTCACTATTCTTATT
TGTATTACAGAGAGAGACAAAATGAAAAATGATCCCCTCAATTTCAATGTACTCAACATC
GTCTTTGAAGTCATCAGTGCATATGGAACTGTTGGAATGTCAATGGGCTATAGTTGTGCA
AGGCAATTAAAACCAGATGTCCATTGCAAAGATGCAGCATATGGATTTGCTGGAAAATGG
AGTAATATGGGAAAGTTCATTCTAATTATTGTCATGTTTTTCGGAAGGCTGAAGCAGTAC
TGTAAAAGAGGTGGCAAGGGCTGGAAAGTATTATAA

Peptide Sequence

PEP ID

XP_016459984.1
PEP Infomation

PREDICTED: sodium transporter HKT1-like isoform X1 [Nicotiana tabacum]
Sequence

MKMKLFSSSYRQGFFFSIFHILNLGVKPFWIEVSYFMILSLLGLLALTISKPRTLPSFRP
QNLDVFFTSVSAATVSSMSTVEMEVFSNAQLVFITMLMFLGGEAFTSFLRLQLMKSKLSM
EKTVLQNKIETSNSIISIDSHDSSNSPRNSIHHLELGHEQEDSNLEHAIINSMEDSEAIV
KLKSLRFLSYVVFGYILGVVVLGSSLVSIYVSFIPSAKQVLKEKGLNLHTFSLFTTVSTF
ANCGFVPTNENMMVFRKNSGLLLILIPQVLLGNTLYAPCLRLTIWFLWKITKRGEFEYIM
KNSKRVGYSHIFPNLETMALATTVLGFISIQFVVFCSLEWNSEATAGLSSYEKLVGSLFE
VVNTRHTGESVFDLSTLTPAILVLFAVMMYLSPYTSFLPIDSNEERLETTERMNRRKGSS
LVEYVSFSHLSYLVIFTILICITERDKMKNDPLNFNVLNIVFEVISAYGTVGMSMGYSCA
RQLKPDVHCKDAAYGFAGKWSNMGKFILIIVMFFGRLKQYCKRGGKGWKVL

Transcript Sequence

Gene sequence data has not been registered.